Czech Society for Structural Biology
Česká společnost pro strukturní biologii



The Czech Society
for Structural Biology
(Česká společnost
pro strukturní biologii

Videnska 1083
CZ-142 20 Prague
Czech Republic

CSSB@structbio.org
VAT number: 0022869433
account num.: 2300076583/2010
IBAN: CZ2820100000002300076583
SWIFT/BIC: FIOBCZPPXXX

Participants of the XII Discussions in Structural Molecular Biology, Nove Hrady, March 13 - 15 2014

 

ID First Last email Title of Presentation Institution City
47 Imrich Barak imrich.barak-at-savba.sk User consortium of serial femtosecond crystallography - Slovak involvement Institute of Molecular Biology Slovak academy of Sciences Bratislava
12 Adriana Baumlova adrianabaumlova-at-gmail.com Structural characterization of phosphatidylinositol 4-phosphate IIalpha Institute of Organic Chemistry and Biochemistry AS CR Prague
77 Lucie Bednarova bednarova-at-uochb.cas.cz Raman microspectroscopy of Candida albicans vacuoles Institute of Organic Chemistry and Biochemistry AS CR Prague
37 Lada Biedermannová lada.biedermannova-at-img.cas.cz Hydrated amino acid rotamers Institute of Biotechnology AS CR Vestec
18 Evžen Bouřa boura-at-uochb.cas.cz Combination of Xtal, SAXS, DEER and FRET data – the structure of ESCRT-I/II supercomplex and implications for membrane budding Institute of Organic Chemistry and Biochemistry AS CR Prague
34 Kristýna Boušová kristyna.bousova-at-gmail.com Calmodulin and S100A1 protein interact with the intracellular termini of the TRPM4 channel Institute of Physiology AS CR Prague
19 Jiří Brynda brynda-at-img.cas.cz X-ray Structural Analysis of Carbonic Anhydrase and Carborane-Based Inhibitors Complexes  Institute of Organic Chemistry and Biochemistry AS CR Prague
94 Jiří Bufka bufkaj-at-gmail.com Synthesis and Spectroscopy of Derivatives of the Fluorescent Protein Chromophore Institute of Organic Chemistry and Biochemistry AS CR Prague
81 Radka Chaloupková radka-at-chemi.muni.cz Comparison of catalytic performance of haloalkane dehalogenases in deep eutectic and organic co-solvents Masaryk University Brno
48 Tatsiana Charnavets tatsiana.charnavets-at-img.cas.cz Structure, stability and thermodynamic characteristics of single stranded DNA in repetitive extragenic palindromic elements Institute of Biotechnology AS CR Vestec
52 Zuzana Chromikova zuzana.chromikova-at-savba.sk Crucial role of SpoIIE in Bacillus subtilis cell differentiation Institute of Molecular Biology Slovak academy of Sciences Bratislava
96 Zdeněk Chval chval-at-jcu.cz Molecular dynamics calculations of the Cy3 and Cy5 cyanine dyes terminally attached to DNA University of South Bohemia in Ceske Budejovice České Budějovice
70 Ladislav Cséfalvay csefalvay-at-nh.cas.cz Purification and Initial Imaging of the type I DNA Restriction-Modification Enzyme EcoR124I by Electron Microscopy Institure of Nanobiology and Structural Biology of GCRC Nové Hrady
110 Oksana Degtjarik degtjarik648-at-gmail.com Crystallization and structural characterization of LinB86 haloalkane dehalogenase mutant University of South Bohemia in Ceske Budejovice Nove Hrady
33 Jan Dohnálek jan.dohnalek-at-img.cas.cz Methods of structural biology of Instruct available to Czech researchers Institute of Biotechnology AS CR Vestec
114 Radka Dopitová radka.dopitova-at-gmail.com Crystal Structure of Phosphotransmitter AHP2 and Modeling of its Interaction with Sensor Histidine Kinase CKI1 - Towards Elucidating Molecular Recognition in the Multistep Phosphorelay Signaling in Plants CEITEC Masaryk University Brno
95 David Dufour Rausell gloria.brossa-at-bestours.es RNA structure prediction by knowledge-based statistical potentials and fragment assembly PARC CIENTIFIC Barcelona
97 Olga Dvořáčková jedla-at-zsf.jcu.cz Influence of substitution effects in the pyridine ring on the reactivity of the trans-[Pt(NH3)2(pyr)Cl]+ complex. University of South Bohemia in Ceske Budejovice České Budějovice
22 Rudiger Ettrich ettrich-at-nh.cas.cz Charybdotoxin unbinding from the mKv1.3 potassium channel: A Combined computational and experimental study Institure of Nanobiology and Structural Biology of GCRC Nove Hrady
39 Karla Fejfarová karlafej-at-gmail.com Crystallization and preliminary X-ray diffraction analysis of nepenthesin-1 Institute of Macromolecular Chemistry AS CR Prague
78 Jan Frömmel jan.frommel-at-centrum.cz Aminoaldehyde dehydrogenase isoenzymes from Pisum sativum oxidize N-acylated aminoaldehydes Palacký University in Olomouc Olomouc
64 Martin Golan martingolan-at-volny.cz Theoretical and experimental study of charge transfer through DNA: impact of mercury attached to mismatched base pairs Charles University in Prague MFF Prague
100 Pavel Grinkevich pavel.grinkevich-at-gmail.com Structure and function of the C-terminal helical domain of the motor subunit HsdR from the type I restriction-modification system EcoR124I University of South Bohemia in Ceske Budejovice České Budějovice
108 Dipanjan Guha guha.dipanjan-at-rediffmail.com Initial imaging and structural analysis of the hamartin-tuberin complex CEITEC Masaryk University Brno
15 Jindřich Hašek hasekjh-at-seznam.cz International appreciation of X-ray crystallography Institute of Biotechnology AS CR Vestec
104 Hedi Hegyi hegyihedi-at-gmail.com Domain Integrity Verification of Alternative Splicing - the DIVAS server CEITEC Masaryk University Brno
111 Jiří Heller hellej01-at-prf.jcu.cz Photosystem II PsbO protein from higher plants University of South Bohemia in Ceske Budejovice České Budějovice
62 Petr Hošek hosekp-at-vscht.cz Moving hills - new parallelizable metadynamic method with fixed amount of bias potential Institute of Chemical Technology in Prague Prague
69 Josef Houser houser-at-mail.muni.cz RSL lectin - a complex approach to study carbohydrate-protein interaction CEITEC Masaryk University Brno
72 Dominik Hrebík 376324-at-mail.muni.cz Interactions between receiver domain of cytokinin receptor CKI1RD and AHP protein from Arabidopsis thaliana Masaryk University Brno
32 Iuliia Iermak julia.ermak90-at-gmail.com Crystallization of glyceraldehyde dehydrogenase from Thermoplasma acidophilum University of South Bohemia in Ceske Budejovice Nove Hrady
86 Moran Jerabek moran.jerabek-at-nanotemper.de MicroScale Thermophoresis: Interaction analysis and beyond NanoTemper Technologies GmbH Muenchen
40 Michaela Jirku michaela.jirku-at-seznam.cz Characterization of the calmodulin and S100A1 binding domains on the N-terminus of TRPM1 receptor Institute of Physiology AS CR Prague
42 Miroslava Kacirova kacirova-at-natur.cuni.cz Structural studies on Pdc/14-3-3 protein complex Charles University in Prague Faculty of Science Prague
80 Radka Končitíková Radka.Koncitikova-at-centrum.cz Structure-function study on enzymes linked to cytokinin metabolism - aldehyde dehydrogenases and nucleoside N-ribohydrolases Palacký University in Olomouc Olomouc
30 Miroslava Kopecka kopeckamirka-at-tiscali.cz Role of EF-hand motif in the activation of neutral trehalase Institute of Physiology AS CR Prague
79 David Kopečný kopecny_david-at-yahoo.co.uk Family of plant nucleoside N-ribohydrolases Palacký University in Olomouc Olomouc
36 Dalibor Kosek dal.kosek-at-gmail.com Characterization of interactions between protein kinase ASK1 and its binding partners. Charles University in Prague Faculty of Science Prague
102 Terézia Kovaľová terezia.kovalova-at-gmail.com Structural and catalytic properties of α-L-fucosidase from Paenibacillus thiaminolyticus Institute of Chemical Technology in Prague Prague
107 Daniela Krajčíková daniela.krajcikova-at-savba.sk Studies of Self-assembly Properties of Bacillus Spore Coat Proteins Institute of Molecular Biology Slovak academy of Sciences Bratislava
55 Tomáš Kroupa kroupat-at-vscht.cz Interaction of M-PMV matrix protein mutants with membranes Institute of Chemical Technology in Prague Prague
68 Monika Krupová krupova.monika-at-yahoo.com Detection of Molecular Chirality in Lanthanide Complexes by the Raman Optical Activity Institute of Organic Chemistry and Biochemistry AS CR Prague
101 Zdeněk Kukačka kukacka-at-biomed.cas.cz Chemical Cross-linking and Hydrogen-Deuterium Exchange –Tools for Precise Definition of Human Haptoglobin Structure Institute of Microbiology AS CR Prague
24 Ivana Kuta Smatanova ivanaks-at-seznam.cz Protein crystallization projects at the Faculty of Science of the USB CB University of South Bohemia in Ceske Budejovice České Budějovice
103 Radomír Kužel kuzel-at-karlov.mff.cuni.cz 2014 - International Year of Crystallography Charles University in Prague MFF Prague
41 Salome Kylarova SalomeK-at-seznam.cz Structural characterization of the thioredoxin-binding domain of protein kinase ASK1 and its interaction with thioredoxin Institute of Physiology AS CR Prague
74 Veronika Lišková verca.liskova-at-centrum.cz Engineering enzyme access tunnels for protein stabilization CEITEC Masaryk University Brno
49 Lucie Marečková lucie.mareckova-at-img.cas.cz KLK2- and KLK11-binding proteins - The novel class of recombinant capture ligands for improved Prostate Cancer diagnostics Institute of Biotechnology AS CR Prague
56 Sérgio Marques smar96-at-gmail.com Investigation of gating mechanisms in the access tunnel of haloakane dehalogenases CEITEC Masaryk University Brno
29 Jiří Maršík jiri.marsik-at-rigaku.com Latest Developments for Life Science from Rigaku Rigaku Europe Sevenoaks
106 Ivana Nemcovicova viruivka-at-savba.sk Cytomegalovirus gpUL141 exhibits unique receptor-binding domain to inhibit cell surface expression of CD155 and TRAIL death receptors Institute of Virology of the Slovak Academy of Sciences Bratislava
88 Daniel Němeček daniel.nemecek-at-ceitec.muni.cz Application of Difference 3D Electron Microscopy to Identify DSS1 Subunits and Induced Conformational Changes in the Complex with Rad52 CEITEC Masaryk University Brno
112 Zora Novakova zora.novakova-at-img.cas.cz The role of the non-pharmacophore pocket of glutamate carboxypeptidase II in the design of small-molecule inhibitors Institute of Biotechnology AS CR Vestec
84 Saurabh Kumar Pandey pandey-at-nh.cas.cz Binding competent states for L-arginine in E. coli arginine repressor apoprotein Institure of Nanobiology and Structural Biology of GCRC Nove Hrady
60 Jiri Pavlicek jiri.pavlicek-at-img.cas.cz Crystal structures of complexes of GCPII with P1’-diversified urea-based inhibitors Institute of Biotechnology AS CR Prague
109 Miroslav Peterek peterek-at-ceitec.muni.cz Assembly and molecular architecture of PI4K IIIa complexes CEITEC Masaryk University Brno
113 Maria Plevaka mariaplevako-at-gmail.com Crystallization and preliminary diffraction analysis of DhaA57, DhaA80 and DhaA106 mutants from Rhodococcus rhodochrous NCIMB 13064 University of South Bohemia in Ceske Budejovice České Budějovice
76 Daniel Pokorný danny.pokorny-at-gmail.com Structural and functional characterization of Ralstonia solanacearum lectin mutant Masaryk University Brno
21 Tatyana Prudnikova talianensis-at-gmail.com Structural analysis of a novel haloalkane dehalogenase DbeA from Bradyrhizobium elkanii USDA94 University of South Bohemia in Ceske Budejovice Roudne
115 Jakub Ptáček jakub.ptacek-at-img.cas.cz Selection and characteriazation of Anticalins specific for human glutamate carboxypeptidase II Institute of Biotechnology AS CR Prague
87 David Reha reha-at-nh.cas.cz Molecular dynamics comparison of E. coli WrbA apoprotein and holoprotein Institure of Nanobiology and Structural Biology of GCRC Nove Hrady
14 Bohdan Schneider bohdan.schneider-at-gmail.com Dynamics of biomolecules estimated by crystallographic B-factors Institute of Biotechnology AS CR Vestec
117 Leona Šerá seral-at-vscht.cz Pump-probe molecular dynamics (PPMD) simulations in GROMACS and its testing on the PDZ domain. Institute of Chemical Technology in Prague Prague
105 Tanvir Shaikh shaikh-at-ceitec.muni.cz Initial bridges between the two ribosomal subunits are formed within 9.4 milliseconds: A time-resolved cryo-EM study CEITEC Masaryk University Brno
51 Katsiaryna Shamayeva shamayeva-at-nh.cas.cz Interdomain communication in the endonuclease/motor subunit of Type I restriction- modification enzyme EcoR124I Institure of Nanobiology and Structural Biology of GCRC Nove Hrady
46 Tereza Skálová t.skalova-at-gmail.com Structures of receptors and ligands of mammalian NK cells Institute of Biotechnology AS CR Vestec
28 Vernon Smith vernon.smith-at-bruker-axs.de Improvements to Data Quality with the PHOTON 100 detector in Shutterless Mode Bruker AXS Karlsruhe
98 Vojtěch Spiwok spiwokv-at-vscht.cz Enhancement of linear vs. non-linear motions in protein folding Institute of Chemical Technology in Prague Prague
44 Jan Stránský str.jan-at-seznam.cz Critical parameters of S-SAD - a real case experience Institute of Biotechnology AS CR Vestec
26 Kvido Strisovsky kvido.strisovsky-at-uochb.cas.cz Crystal structures of rhomboid intramembrane protease bound to substrate peptides elucidate the basis of substrate specificity and mechanism. Institute of Organic Chemistry and Biochemistry AS CR Prague
120 David Stuart dave-at-strubi.ox.ac.uk Challenges of virus crystallography University of Oxford Oxford
99 Zoran Šućur sucurz-at-yahoo.com Exploring free energy surface of oxytocin by using well-tempered metadynamics Institute of Chemical Technology in Prague Prague
75 Petra Szelcsányiová Petra.Szelcsanyi-at-seznam.cz Modification of substrate specificity and catalytic activity of haloalkane dehalogenase linb by opening de novo access tunnels CEITEC Masaryk University Brno
58 Katsiaryna Tratsiak ktratsiak-at-gmail.com Haloalkane dehalogenases: DmxA from Marinobacter sp. ELB 17 and DpcA from Psychrobacter cryohalolentis K5, from the crystallization to the structure analysis University of South Bohemia in Ceske Budejovice Nove Hrady
38 Ekaterina Tutubalina tutubalinakate-at-mail.ru Crystallization of FrpC protein University of South Bohemia in Ceske Budejovice České Budějovice
83 Matej Zábrady zabradymatej-at-gmail.com Recombinant antibodies for in vivo applications CEITEC Masaryk University Brno
61 Petra Zadravec petra.zadravec-at-ffa.uni-lj.si Development of lactic acid bacterium capable of binding Shiga toxin on the surface University of Ljubljana Ljubljana
63 Vojtěch Zapletal vojtis-at-mail.muni.cz NMR study of haloalkane dehalogenase DhaA: resonance assignment and relaxation CEITEC Masaryk University Brno
73 Paulína Božíková paulina.bozikova-at-gmail.com   Institute of Biotechnology AS CR Vestec
92 Ladislav Bumba bumba-at-biomed.cas.cz   Institute of Microbiology AS CR Prague
122 Jiří Černý jiri.cerny-at-img.cas.cz   Institute of Biotechnology AS CR Vestec
13 Dominika Chalupská chalupska-at-uochb.cas.cz   Institute of Organic Chemistry and Biochemistry AS CR Prague
57 Richard Hrabal hrabalr-at-vscht.cz   Institute of Chemical Technology in Prague Prague
82 Lubomir Janda ljanda-at-sci.muni.cz   CEITEC Masaryk university Brno
16 Martin Klíma klima-at-uochb.cas.cz   Institute of Organic Chemistry and Biochemistry AS CR Prague
43 Lucie Kolářová kolarovalucie007-at-gmail.com   Institute of Biotechnology AS CR Vestec
45 Petr Kolenko kolenko-at-imc.cas.cz   Institute of Macromolecular Chemistry AS CR Prague
116 Michal Kutý kutym-at-seznam.cz   University of South Bohemia in Ceske Budejovice České Budějovice
85 Petr Malý petr.maly-at-img.cas.cz   Institute of Biotechnology AS CR Prague
124 Pavel Martásek pavel.martasek-at-gmail.com   First Medical Faculty of UK Prague
90 Boris Míč boris.mic-at-mt-m.eu   Merici technika Morava Zastávka
53 Pavel Mikulecký pavel.mikulecky-at-img.cas.cz   Institute of Biotechnology AS CR Vestec
121 Phuong Ngoc Pham ngocphuongpham85-at-gmail.com   Institute of Biotechnology AS CR Vestec
118 Petr Novák pnovak-at-biomed.cas.cz   Institute of Microbiology AS CR Vestec
91 Dušan Novotný dusan.novotny-at-mt-m.eu   Merici technika Morava Zastávka
67 Jaroslav Nunvář botanik-at-atlas.cz   Institute of Biotechnology AS CR Vestec
35 Tomáš Obšil obsil-at-natur.cuni.cz   Charles University Faculty of Science Prague
31 Veronika Obsilova obsilova-at-biomed.cas.cz   Institute of Physiology AS CR Prague
119 Petr Pompach pompach-at-biomed.cas.cz   Institute of Microbiology AS CR Prague
54 Jan Prchal prchalj-at-vscht.cz   Institute of Chemical Technology in Prague Prague
27 Karel Pufler karel.pufler-at-img.cas.cz   Institute of Biotechnology AS CR Prague
17 Lenka Rezabkova lenka.rezabkova-at-gmail.com   Paul Scherrer Institute Switzerland
71 Klaudia Šarmírová klaudia.sarmirova-at-gmail.com   Masaryk University Brno
20 Vladimir Sklenar

vladimir.sklenar-at-ceitec.muni.cz

  CEITEC Masaryk University Brno
93 Rostislav Škrabana rostislav.skrabana-at-savba.sk   Institute of Neuroimmunology SAS Bratislava
66 Leona Švecová svecova.leona-at-seznam.cz   Czech Technical University Prague
89 Daniel Svozil svozild-at-vscht.cz   Institute of Chemical Technology in Prague Prague
25 Ivan Tomcik ivantomcik-at-ymail.com   Institute of Organic Chemistry and Biochemistry AS CR Prague
50 Lucie Vaňková lucie.vankova-at-img.cas.cz   Institute of Biotechnology AS CR Prague
65 Jiri Vondrasek jiri.vondrasek-at-uochb.cas.cz   Institute of Organic Chemistry and Biochemistry AS CR Prague
59 Milan Zachrdla mzachy-at-mail.muni.cz   CEITEC Masaryk University Brno
123 Jiří Zahradník Tylai-at-seznam.cz   Institute of Biotechnology AS CR Vestec