Czech Society for Structural Biology
Česká společnost pro strukturní biologii



The Czech Society
for Structural Biology
(Česká společnost
pro strukturní biologii

Videnska 1083
CZ-142 20 Prague
Czech Republic

CSSB@structbio.org
VAT number: 0022869433
account num.: 2300076583/2010
IBAN: CZ2820100000002300076583
SWIFT/BIC: FIOBCZPPXXX

Nové Hrady, 14 - 16 March 2013 

 

ID

First

Last

Email

Institution

City

Presentation

Title of presentation

405

Hana

Barvíková

h.barvikova_at_centrum.cz

University of South Bohemia, Faculty of Science

České Budějovice

poster

Computational study of interactions of organic matter and biomolecules with mineral surfaces

404

Lucie

Bednárová

bednarova_at_uochb.cas.cz

Inst. Organic Chemistry and Biochemistry AS CR

Prague

talk

Antimicrobial peptides interacting with model membranes. Spectroscopic study.

477

Vitali

Bialevich

bialevich_at_nh.cas.cz

Institute of Nanobiology and Structural Biology

Nove Hrady

poster

Proposed translocation cycle of the restriction-modification system EcoR124I

439

Ľubomír

Borko

borko.l.jr_at_gmail.com

Institute of Molecular Biology SAS

Bratislava

talk

Human cardiac ryanodine receptor: structural study of the N-terminal region

385

Evžen

Bouřa

boura_at_uochb.cas.cz

Institute of Organic Chemistry and Biochemistry AS CR, v.v.i.

Prague

talk (30)

The crystal structure of the Phi6 major capsid protein

394

Jaroslav

Burda

burda_at_karlov.mff.cuni.cz

Charles University

Prague

talk

Reaction Mechanism of Ru(II) Piano-Stool Complexes; Umbrella Sampling QM/MM MD Study

443

Ondrej

Cehlár

ondrej.cehlar_at_savba.sk

Institute of Neuroimmunology, SAS

Bratislava

talk

Structural insight into the conformation of one of the microtubule binding motifs on the Alzheimer’s disease-associated protein tau

444

Lukas

Daniel

lukecz.uo_at_gmail.com

Masaryk University

Brno

talk

Role of the buried halide-binding site of haloalkane dehalogenase DbeA

391

Oksana

Degtjarik

degtjarik_at_frov.jcu.cz

University of South Bohemia

Nove Hrady

talk

Preparation, Crystallization and Preliminary Structural Analysis of AHP2 Protein, the Signal Transmitter from Arabidopsis thaliana

481

Sinha

Dhiraj

sinha_at_nh.cas.cz

Institute of Nanobiology & Structural Biology of GCRC

Nove Hrady

talk

Interdomain communication and interaction in the motor subunit of restriction modification system EcoR1241 from E.coli

416

Jan

Dohnálek

dohnalek007_at_gmail.com

Institute of Macromolecular Chemistry AS CR

Prague

talk (30)

Metals and ions in protein structures – from essential to marginal questions in identification of ions in enzymes and receptors

448

Jarmila

Dušková

duskova_at_imc.cas.cz

Institute of Macromolecular Chemistry

Prague

poster

Extracellular chitinolytic enzymes of Clostridium Paraputrificum J4; separation and characterization.

427

John

Engen

j.engen_at_neu.edu

Northeastern University Boston

Boston

talk (30)

Hydrogen exchange mass spectrometry to probe the conformation of proteins both in solution and in membranes

482

Rudiger

Ettrich

ettrich_at_nh.cas.cz

GCRC, AS CR

Nove Hrady

poster

Biphasic kinetic behavior of FMN-dependent NAD(P)H:quinone oxidoreductase WrbA from E. coli: A molecular understanding

465

Jan

Frömmel

jan.frommel_at_centrum.cz

Palacký University Olomouc, Faculty of Science

Olomouc

talk

Aminoaldehyde dehydrogenase 1 from tomato – enzyme structure and possible use for the detection of aldehydes in beverages

430

Katarína

Hlat-Glembová

hlatglek_at_vscht.cz

Institute of Chemical Technology, Prague

Prague

poster

Prediction and structural studies of active site of selected glycosyl hydrolases from Paenibacillus thiaminolyticus

441

Tatsiana

Holubeva

holubeva_at_nh.cas.cz

University of South Bohemia in Ceske Budejovice, FFPW

Nove Hrady

poster

Isolation and crystallization of the recombinant PsbR protein of higher-plant photosystem II

437

Petr

Hošek

hosekp_at_vscht.cz

Institute of Chemical Technology, Prague

Prague

poster

Combination of alchemical free energy simulation and metadynamics in the simulation package GROMACS

426

Josef

Houser

houser_at_mail.muni.cz

Masaryk University, Faculty of Science

Brno

talk

The power is in detail - structural analysis of an Aleuria aurantia lectin mutant

389

Dominik

Hrebík

376324_at_mail.muni.cz

Masaryk University, Faculty of Science

Šaľa

poster

Magnesium binding to the receiver domain of cytokinin receptor CKI1RD from Arabidopsis thaliana

425

Michaela

Jirků

michaela.jirku_at_seznam.cz

Institute of Physiology, AS CR

Prague

poster

Ca2+ binding proteins interact with the N-terminal region of TRPM1

420

Ivo

Kabelka

357312_at_mail.muni.cz

Masaryk University

Brno

poster

Study of bsobi endonuclease by molecular dynamics

428

Miroslava

Kacířová

mirkakacirova_at_seznam.cz

Charles University in Prague, Faculty of Science

Prague

poster

Mapping of the interaction surface of phosducin using HDX-MS

453

Alan

Kádek

kadek_at_biomed.cas.cz

Institute of Microbiology, AS CR & Dept. of Biochemistry, Charles University in Prague

Prague

talk

In-solution structure of cellobiose dehydrogenase probed by hydrogen / deuterium exchange mass spectrometry

483

Alina

Kevorkova

kev.alina.art_at_gmail.com

Institute of Nanobiology and Structural Biology of GCRC, AS CR

Nove Hrady

poster

Functional coupling of duplex translocation to DNA cleavage in a type I restriction enzyme

390

Petr

Kolenko

kolenko_at_imc.cas.cz

Institute of Macromolecular Chemistry AS CR, v.v.i.

Prague

talk (30), poster

Inhibitors of glutaminyl cyclases against Alzheimer's disease, Yfid from E.coli as a Pfl repair protein

456

Radka

Končitíková

Radka.koncitikova_at_centrum.cz

Palacky University Faculty of Science

Olomouc

poster

Structural characterization of two maize aldehyde dehydrogenases from family 2

409

Miroslava

Kopecká

kopeckamirka_at_tiscali.cz

Institute of Physiology AS CR, v.v.i.

Prague

poster

How calcium and Bmh1 activate yeast neutral trehalase Nth1?

410

Dalibor

Kosek

dal.kosek_at_gmail.com

Charles University in Prague, Faculty of Science

Prague

poster

Biophysical study of the complex between the 14-3-3 protein and the kinase domain of ASK1

449

Tomas

Koval

koval.tomas_at_gmail.com

Institute of Macromolecular Chemistry AS CR, v. v. i.

Prague

poster

Structure of multifunctional plant nuclease TBN1

383

Irena

Kratochvílová

krat_at_fzu.cz

Institute of Physics AS CR

Prague

talk

Charge transport through DNA/DNA duplexes and DNA/RNA hybrids: complex mechanism study

435

Tomas

Kroupa

tomas.kroupa_at_vscht.cz

Institute of Chemical Technology in Prague

Prague

talk

Interaction of the myristoylated M-PMV matrix protein and his mutants with phospholipids

476

Natallia

Kulik

kulik_at_nh.cas.cz

GCRC, AS CR

Nove Hrady

poster

Homology modeling of fungal hexosaminidase from T.flavus with high substrate promiscuity

471

Ivana

Kutá Smatanová

ivanaks_at_seznam.cz

University of South Bohemia

Nove Hrady

poster

Practical aspects of protein crystallography

472

Michal

Kutý

kutym_at_seznam.cz

Univeristy of South Bohemia

Ceske Budejovice

poster

Towards a structure of green plant Photosystem II

487

Mikalai

Lapkouski

lapkouski_at_nh.cas.cz

GCRC, AS CR

Nove Hrady

talk (30)

Complexes of HIV-1 RT and DNA/RNA hybrid reveal structure compatible with RNA degradation

392

Lucie

Marečková

lucie.mareckova_at_img.cas.cz

Institute of Biotechnology of the ASCR, v. v. i.

Prague

poster

Novel binders derived from an albumin-binding domain scaffold targeting Prostate Secretory Protein-94

400

Petra

Matunová

Petra.Matunova_at_seznam.cz

Charles University in Prague, Faculty of Mathematics and Physics

Prague

poster

Thermodynamic and kinetic parameters for interaction of selected Pt(II) complexes with guanine

452

Radek

Matuska

radek.matuska_at_gmail.com

Masaryk University, CEITEC

Brno

talk

CH-pi Interaction between Carbohydrates and Aromatic Moieties: Electron Density Issue

447

Pavel

Mikulecký

pavel.mikulecky_at_img.cas.cz

Institute of Biotechnology, AS CR, v.v.i.

Prague

poster

Rational design of high-affinity variants of interferon-gamma receptor 1

480

Babak

Minofar

babakminoofar_at_gmail.com

Institute of Nanobiology and Structural Biology, AV CR

Nove Hrady

talk

Structure and dynamics of biomolecules in non-aqueous ionic solutions

386

Daniel

Němeček

daniel.nemecek_at_ceitec.muni.cz

Masaryk University, CEITEC

Brno

talk

Cryo-EM Reconstruction of the Bacteriophage ϕ6 Procapsid at Near-Atomic Resolution Shows Conformational Changes in dsRNA Virus Maturation

417

Petr

Novák

pnovak_at_biomed.cas.cz

Institute of Microbiology, AS CR

Praue

talk

NKR-P1C Structural Model Revealed by Mass Spectrometry.

458

Jaroslav

Nunvář

nunvar_at_natur.cuni.cz

Institute of Biotechnology, AS CR

Prague

talk

Evolution of genetic diversity of repetitive extragenic palindromic elements (REPs): A comparative study

431

Pavel

Oborský

oborskyp_at_vscht.cz

Institute of Chemical Technology, Prague

Prague

poster

Digital metadynamics: New biased simulation concept and its testing on the conformational equilibrium of Ac-Ala-NHMe

486

Saurabh

Pandey

pandey_at_nh.cas.cz

GCRC, AS CR

Nove Hrady

poster

Computational simulation of trimer rotation in hexameric Argine repressor from e.coli

424

Jiří

Pavlíček

jiri.pavlicek_at_img.cas.cz

Institute of Biotechnology, AS CR, v.v.i.

Prague

poster

Gateway-based system for optimization of recombinant protein expression in K. lactis

442

Jakub

Ptáček

jakub.ptacek_at_img.cas.cz

Institute of Biotechnology, AS CR

Prague

poster

Selection and characterization of Anticalin-based binders targeting human glutamate carboxypeptidase II

479

David

Reha

reha_at_nh.cas.cz

Institute of Nanobiology and Structural Biology, AS CR

Nove Hrady

poster

Biological Applications of QM/MM Calculations with Polarized Embedding

474

Bohdan

Schneider

bohdan_at_img.cas.cz

Institute of Biotechnology AS CR

Vestec

talk (30)

Analysis of protein/DNA interactions by novel bioinformatic tools

455

Marek

Šebela

marek.sebela_at_upol.cz

Palacky University Faculty of Science

Olomouc

talk (30)

Analysis of heterogeneous hinge-region O-glycosylation of human IgA1 using MALDI-TOF/TOF mass spectrometry

414

Tereza

Skálová

t.skalova_at_gmail.com

Institute of Macromolecular Chemistry AS CR

Prague

poster

Structural properties of NK receptors and ligands with C-type lectine-like fold

445

Rostislav

Škrabana

rostislav.skrabana_at_savba.sk

Institute of Neuroimmunology, SAS

Bratislava

poster

Validation of a high-throughput setup for manual assembly of nanolitre vapour-diffusion protein crystallization screens

901

Vernon

Smith

Vernon.Smith_at_bruker-axs.de

Bruker AXS GmbH

Karlsruhe

talk (30)

Getting the best data from your crystal

475

Žofie

Sovová

sovova_at_nh.cas.cz

Institute of Nanobiology and Structural Biology, GCRC, ASCR

Nové Hrady

talk

Thylakoid membrane characterization and its interaction with PsbI protein from photosystem II

415

Jan

Stránský

stransky_at_imc.cas.cz

Institute of macromolecular Chemistry AS CR

Prague

talk

Plant nuclease TBN1 involved in apoptotic processes blocks its active site by a surface loop Ð sign of regulatory function?

470

Kvido

Stříšovský

kvido.strisovsky_at_uochb.cas.cz

Inst. Organic Chemistry and Biochemistry AS CR

Prague

talk (30)

Structural and mechanistic principles of intramembrane proteolysis - lessons from rhomboids

457

Petr

Těšina

tesina_at_uochb.cas.cz

Inst. Organic Chemistry and Biochemistry AS CR

Prague

talk

Structural study of LEDGF/p75 binding partners

459

Katsiaryna

Tratsiak

tratsiak_at_frov.jcu.cz

University of South Bohemia in Ceske Budejovice, FFPW

Nové Hrady

poster

Characterization of the selected haloalkane dehalogenases crystals specific activity towards to their substrates

397

Lucie

Vaňková

lucie.vankova_at_img.cas.cz

Institute of Biotechnology AS CR, v.v.i.

Prague

poster

Human IL-23 receptor antagonists derived from an albumin-binding domain scaffold inhibit IL-23-dependent ex vivo expansion of IL-17-producing T-cells

902

Mike

Williams

mike.williams_at_malvern.com

Malvern Instruments

Worcestershire

talk (30)

Protein characterisation using DLS – measurement principle and technology typical applications, limitations and troubleshooting, the new Zetasizer Nano

408

Milan

Zachrdla

324489_at_mail.muni.cz

Masaryk University

Brno

poster

NMR Investigation of Unstructured Malaria Surface Protein MSP2, Isoform 3D7

436

Vojtěch

Zapletal

vojtis_at_mail.muni.cz

Masaryk University

Brno

poster

Motions of biomoleculs monitored by spectral density mapping

402

Lukáš

Žídek

lzidek_at_chemi.muni.cz

Masaryk University, CEITEC

Brno

talk (30)

Molecular motions monitored by NMR relaxation – a conservative approach

396

Jitka

Žídková

zidkova_at_iach.cz

Institute of Analytical Chemistry of the AS CR, v. v. i.

Brno

poster

Glycoproteins and Protein Glycations Identified in Barley Grain and Malt by 2D-HPLC and MS/MS

464

Petr

Ashcheulov

ashcheulov_at_fzu.cz

Institute of Physics AS CR

Prague

poster

Influence of specific boron defects on boron-doped diamond conductivity 

485

Cyril

Bařinka

cyril.barinka_at_img.cas.cz

Institute of Biotechnology AS CR

Prague

na

 

388

Adriana

Baumlová

adrianabaumlova_at_gmail.com

Charles University, Faculty of Science; IOCHB AS CR

Prague

na

 

403

Kristýna

Boušová

kristyna.bousova_at_gmail.com

Institute of Physiology AS CR, v.v.i.

Prague

na

 

463

Pavel

Brázda

269313_at_chemi.muni.cz

Masaryk University, CEITEC

Brno

na

 

423

Jiří

Brynda

brynda_at_img.cas.cz

Institute of Molecular Genetic AS CR

Prague

na

 

422

Ladislav

Bumba

bumba_at_biomed.cas.cz

Institute of Microbiology AS CR

Prague

na

 

384

Jiří

Černý

jiri.cerny_at_img.cas.cz

Institute of Biotechnology, AS CR

Vestec

na

 

460

Eva

Chaloupková

262489_at_mail.muni.cz

Masaryk University, CEITEC

Brno

na

 

399

Tania

Charnavets

tatsiana.chernovets_at_img.cas.cz

Institute of Biotechnology, AS CR

Prague

na

 

421

Karla

Fejfarová

fejfarova_at_imc.cas.cz

Institute of Macromolecular Chemistry AS CR, v. v. i.

Prague

na

 

451

Jan

Hejátko

hejatko_at_sci.muni.cz

Masaryk University, CEITEC

Brno

na

 

433

Richard

Hrabal

hrabalr_at_vscht.cz

Institute of chemical Technology in Prague

Prague

na

 

903

Jiří

Hrdlička

hrdlicka_at_anamet.cz

ANAMET s.r.o.

Prague

na

 

484

Jozef

Hritz

hritz_at_ceitec.muni.cz

Masaryk University, CEITEC

Brno

na

 

478

Lubomir

Janda

ljanda_at_sci.muni.cz

Masaryk University

Brno

na

 

461

Tomasz

Kabzinski

tomasz.kabzinski_at_gmail.com

Masaryk University

Brno

na

 

438

Pavel

Kadeřávek

kada_at_ncbr.muni.cz

Masaryk University

Brno

na

 

489

Jaroslav

Kolejka

jkolejka_at_tainstruments.com

TA Instruments

Prague

na

 

454

David

Kopečný

kopecny_david_at_yahoo.co.uk

Palacký University Faculty of Science Olomouc

Olomouc

na

 

432

Vojtech

Kuban

236585_at_mail.muni.cz

Masaryk University, CEITEC

Brno

na

 

469

Karel

Kubíček

karelk_at_physics.muni.cz

Masaryk University, CEITEC

Brno

na

 

419

Petr

Kulhánek

kulhanek_at_chemi.muni.cz

Masaryk University, CEITEC

Brno

na

 

467

Jakub

Macošek

jmacosek_at_mail.muni.cz

Masaryk University, CEITEC

Brno

na

 

429

Petr

Man

pman_at_biomed.cas.cz

Institute of Microbiology, AS CR

Prague

na

 

387

Boris

Míč

boris.mic_at_bruker-axs.cz

Bruker s.r.o.

Brno

na

 

413

Tomáš

Obšil

obsil_at_natur.cuni.cz

Charles University in Prague, Faculty of Science

Prague

na

 

407

Veronika

Obšilová

obsilova_at_biomed.cas.cz

Institute of Physiology, AS CR, v.v.i.

Prague

na

 

462

Joanna

Oniskiewicz

asiaon_at_gmail.com

Masaryk University, CEITEC

Brno

na

 

411

Blanka

Pekarová

pekarova_at_sci.muni.cz

Masaryk University, CEITEC

Brno

na

 

412

Hana

Petroková

petrokova_at_img.cas.cz

Institute of Biotechnology AS CR

Prague

na

 

434

Jan

Prchal

prchalj_at_vscht.cz

Institute of Chemical Technology, Prague

Prague

na

 

446

Tatyana

Prudnikova

talianensis_at_gmail.com

University od South Bohemia

Nove Hrady

na

 

395

Karel

Pufler

karel.pufler_at_img.cas.cz

Institute of Biotechnology AS CR

Prague

na

 

466

Jakub

Šebera

sebera_at_fzu.cz

Institute of Physics AS CR

Prague

poster

 Theoretical study of metal ion binding in modified and natural cytosine-cytosine base pairs

450

Vladimír

Sklenář

vladimir.sklenar_at_ceitec.muni.cz

Masaryk University, CEITEC

Brno

na

 

468

Richard

Štefl

richard.stefl_at_ceitec.muni.cz

Masaryk University, CEITEC

Brno

na

 

418

Jakub

Štěpán

xstepan3_at_chemi.muni.cz

Masaryk University, CEITEC

Brno

na

 

401

Jiří

Zahradník

Tylai_at_seznam.cz

Institute of Biotechnology AS CR

Prague

na

 

488

Sebastian

Zoll

zoll_at_uochb.cas.cz

Inst. Organic Chemistry and Biochemistry AS CR

Prague

na

 

393

Iva

Zusková

iva.zuskova_at_img.cas.cz

Institute of Biotechnology AS CR

Prague

na

 

Please, send questions, requests to Bohdan Schneider

 

INVESTMENTS IN EDUCATION DEVELOPMENT

Organizers of the meeting Bohdan Schneider, Radek Kužel, Ivana Kutá-Smatanová, Rudiger Ettrich, Anita Zupčanová, Petr Novák, Jindřich Hašek, Jan Dohnálek

 

(c) Bohdan Schneider 2013